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miRNA Crosstalk network_5 - Coggle Diagram
miRNA Crosstalk network_5
/Users/hsinyu/Desktop/TCGA/references/SuTinLai_project/0_scripts/correlations/
corr_0.26rpm_precursor_isomir_idsame_v2.R
/mnt/ntfs/Christine/data
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
hsa22.gff3
/mnt/ntfs/Christine/data
correlation_precursor_isomir_tumor_and_zscore_idsame_hsa22_0.26rpm_442_v2.txt
fisher_odds_seed_isomir_z_score.R
(X)
corr_0.26rpm_precursor_archetype_v2.R corr_0.26rpm_precursor_isomir_v2.R
/mnt/ntfs/Christine/data
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
hsa22.gff3
/mnt/ntfs/Christine/data
correlation_precursor_archetype_tumor_and_zscore_hsa22_0.26rpm_442_v2.txt
correlation_precursor_isomir_tumor_and_zscore_hsa22_0.26rpm_442_v2.txt
scc_after_fisher.R
/mnt/ntfs/Christine/data
LUAD_tumor_isomir_hsa22_over0.26rpm_430_normalization_v2.txt
fisher_mir_mir_over0.26rpm_sig_normalization_v2.txt
LUAD_tumor_archetype_hsa22_over0.26rpm_430_normalization_v2.txt
/mnt/ntfs/Christine/tmp_output/scc_mir_mir
scc_after_fisher_over0.26rpm_nor_v2_11660.txt........
corr_0.26rpm_seed_archetype_v2.R corr_0.26rpm_seed_isomir_v2.R
/mnt/ntfs/Christine/data
LUAD_T_groupby_seed_6mer_archetype_sample_over6.txt
LUAD_T_groupby_seed_6mer_isomir_sample_over6.txt
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
/mnt/ntfs/Christine/data
correlation_seed_arche_tumor_and_zscore_hsa22_0.26rpm_442_v2.txt
correlation_seed_isomir_tumor_and_zscore_hsa22_0.26rpm_442_v2.txt
merge_anti_coexpress_mir_target.py
/mnt/ntfs/Christine/tmp_output/scc_mir_target /mnt/ntfs/Christine/data
tumor_isomir_over0.26rpm_3_scores_nor_v2_12852.txt......
scc_archetype_target_over0.26rpm_normalization.txt
tumor_archetype_over0.26rpm_3_scores_nor_v2_11908.txt.....
scc_isomir_target_over0.26rpm_normalization.txt
/mnt/ntfs/Christine/data
scc_isomir_target_over0.26rpm_normalization.txt
scc_isomir_target_anti_sig_over0.26rpm_normalization.txt
scc_archetype_target_anti_sig0.01_over0.26rpm_normalization.txt
scc_isomir_target_anti_sig0.01_over0.26rpm_normalization.txt
scc_archetype_target_anti_sig_over0.26rpm_normalization.txt
scc_archetype_target_over0.26rpm_normalization.txt
dominate_shift_sibling_0.26_v2.R
/mnt/ntfs/Christine/data
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
LUAD_tumor_isomirs_seq_info_ALL.txt
/mnt/ntfs/Christine/plot
LUAD_dominate_sibling_nor0.26_tumor_22_v2.pdf
LUAD_dominate_sibling_nor0.26_tumor_n22_n23_v2.pdf
LUAD_dominate_sibling_nor0.26_tumor_n22_v2.pdf
LUAD_dominate_sibling_nor0.26_tumor_22_23_v2.pdf
seed_isomir_distribution_16_isomir_v2.pdf......
merge_scc_coexpress_v2.py
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/over_0.26
scc_after_fisher_over0.26rpm_nor_19652.txt........
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/over_0.26
scc_mir_mir_over0.26rpm_coexpress_sig_normalization.txt
edgelist_tumor_over0.26rpm_normalization.txt
fisher_mir_target.R
/mnt/ntfs/Christine/data
scc_archetype_target_anti_sig_over0.26rpm_normalization.txt
scc_isomir_target_anti_sig_over0.26rpm_normalization.txt
/mnt/ntfs/Christine/tmp_output/fisher_mir_target
fisher_tumor_mir_target_over0.26rpm_3_scores_nor_10316.txt
transform_zscore_from_scc.R
/mnt/ntfs/Christine/data
LUAD_T_top_seed16_mir_target.txt....
/mnt/ntfs/Christine/data
LUAD_T_top_seed16_mir_target_scc_z_pval.txt...
corr_0.26rpm_any_same_seed_v2.R
/mnt/ntfs/Christine/data
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
LUAD_T_groupby_seed_6mer.txt
scc_of
any2seed
.txt.......... (X)
scc_archetype_target_pair.R
scc_isomir_target_pair.R
/mnt/ntfs/Christine/data
tumor_archetype_clean_intersection_3_scores.txt
LUAD_tumor_isomir_hsa22_over0.26rpm_430_normalization_v2.txt
tumor_archetype_TC_intersection_3_scores.txt
tumor_isomir_intersection_3_scores.txt
FPKM_LUAD_tumor_matrix_verNA_mapcol.txt
tumor_isomir_update66_3_scores.txt
LUAD_tumor_archetype_hsa22_over0.26rpm_430_normalization_v2.txt
/mnt/ntfs/Christine/tmp_output/scc_mir_target
tumor_archetype_over0.26rpm_3_scores_nor_v2_11908.txt........
tumor_isomir_over0.26rpm_3_scores_nor_v2_12852.txt.......
merge_any2corr_v2.py
/mnt/ntfs/Christine/tmp_output/corr_any2mir
corr_any2mir_13124.txt.....
/mnt/ntfs/Christine/tmp_output/corr_any2mir
any2mir_corr_v2.txt
any2isomir_possible_pair_v2.R
/mnt/ntfs/Christine/data /mnt/ntfs/Christine/tmp_output/corr_any2mir :
LUAD_tumor_hsa22_over0.26rpm_normalized_rpm_v3.txt
any2mir_corr_v2.txt
/mnt/ntfs/Christine/tmp_output/corr_any2mir /mnt/ntfs/Christine/data
corr_any2mir_13124.txt.....
any2mir_corr_zover2_sig_v2.txt
merge_mir_target_fisher.py
/mnt/ntfs/Christine/tmp_output/fisher_mir_target
fisher_tumor_mir_target_over0.26rpm_3_scores_nor_10316.txt......
/mnt/ntfs/Christine/data
scc_archetype_target_anti_sig0.01_over0.26rpm_normalization.txt
scc_isomir_target_anti_sig0.01_over0.26rpm_normalization.txt
fisher_mir_mir_over0.26rpm_sig_normalization_v2.txt
fisher_mir_mir_over0.26rpm_sig0.01_normalization_v2