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miRNA crosstalk network_1 - Coggle Diagram
miRNA crosstalk network_1
/mnt/ntfs/Christine/before_NOV_20/0_scripts
map_community_seed.py
/mnt/ntfs/Christine/before_NOV_20. /mnt/ntfs/Christine/before_NOV_20/link_communities
LUAD_tumor_isomirs_seq_info_ALL.txt
community_103217.txt
merge_any2corr.py
/mnt/ntfs/Christine/before_NOV_20/any2mir
corr_any2mir_11492.txt.......
/mnt/ntfs/Christine/before_NOV_20/any2mir
any2mir_corr.txt
network_description.py
/mnt/ntfs/Christine/before_NOV_20/link_communities
edgelist_tumor_over0.26rpm_normalization.txt
plot
2_map_to_ppi.R
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi. /mnt/ntfs/Christine/before_NOV_20/link_communities/x_ppi_scc
scc_n103506_pct25_coexpression_sig.txt
scc_n103338_pct25_coexpression_sig.txt
scc_n103529_pct25_coexpression_sig.txt
scc_n103217_pct25_coexpression_sig.txt
Ensembl_PIN_of_InBio_Map.txt
scc_n103103_pct25_coexpression_sig.txt
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi/x
n103338_ppi_25.txt
n103217_ppi_25.txt
n103506_ppi_25.txt
n103103_ppi_25.txt
merge_scc_coexpress_v2.py
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/over_0.26
scc_after_fisher_over0.26rpm_nor_19652.txt........
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/over_0.26
scc_mir_mir_over0.26rpm_coexpress_sig_normalization.txt
edgelist_tumor_over0.26rpm_normalization.txt
1_merge_ppi_scc.py
/mnt/ntfs/Christine/before_NOV_20/link_communities/x_ppi_scc/nofilter/n103338
n103338_nofilter_pct25_11452.txt......
/mnt/ntfs/Christine/before_NOV_20/link_communities/x_ppi_scc
scc_n103529_pct50_coexpression_sig.txt
scc_n103529_pct75_coexpression_sig.txt
scc_n103529_pct25_coexpression_sig.txt
merge_fisher.py
/mnt/ntfs/Christine/before_NOV_20/fisher_result/over_0.26
fisher_tumor_all_over0.26rpm_3_scores_nor_11504.txt........
/mnt/ntfs/Christine/before_NOV_20/fisher_result/over_0.26
fisher_mir_mir_over0.26rpm_sig_normalization.txt
3_sort_by_percentages.R
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi/x
n103338_ppi_25.txt
n103506_ppi_25.txt
n103217_ppi_25.txt
n103529_ppi_25.txt
n103103_ppi_25.txt
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi/x
n103338_pct50.txt
n103506_pct50.txt
n103217_pct50.txt
n103529_pct50.txt
n103103_pct50.txt
scc_after_fisher.R
/mnt/ntfs/Christine/before_NOV_20 /mnt/ntfs/Christine/before_NOV_20/fisher_result/over_0.26
LUAD_tumor_isomir_hsa22_over0.26rpm_430_normalization.txt
fisher_mir_mir_over0.26rpm_sig_normalization.txt
LUAD_tumor_archetype_hsa22_over0.26rpm_430_normalization.txt
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/over_0.26
scc_after_fisher_over0.26rpm_nor_19652.txt........
ppi_scc_of_gene_list.R
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi
n103217_13_degree_2_edge_list.txt
n103338_20_degree_5_edge_list.txt
n103103_23_degree_4_edge_list.txt
n103506_89_degree_6_edge_list.txt
Ensembl_PIN_of_InBio_Map.txt
n103529_5_degree_1_edge_list.txt
FPKM_LUAD_tumor_matrix_verNA.txt
/mnt/ntfs/Christine/before_NOV_20/link_communities/ppi/output
n103103_ppi_rawSCC_pct50_17468.txt......
n103103_ppi_rawSCC_pct75_17468.txt
n103103_ppi_coexpress_sig_pct75.txt
new_fisher.R
/mnt/ntfs/Christine/before_NOV_20/SCC_result
scc_mir_target_anti_sig_isomir_over0.26rpm_normalization.txt
total_gene_number_over0.26rpm.txt
scc_mir_target_anti_sig_archetype_over0.26rpm_normalization.txt
/mnt/ntfs/Christine/before_NOV_20/fisher_result/over_0.26
fisher_tumor_all_over0.26rpm_3_scores_nor_11504.txt........
0_scc_ppi.R
/mnt/ntfs/Christine/data
dominant_mp_prefershift_80pct_arche_target.txt
dominant_mp_prefershift_80pct_isomir_target.txt
FPKM_LUAD_tumor_matrix_verNA.txt
/mnt/ntfs/Christine/tmp_output/mp_prefershift_ppi. /mnt/ntfs/Christine/tmp_output/mp_prefershift_ppi/新增資料夾
dominant_mp_prefershift_arche_ppi_pct25_12280.txt
dominant_mp_prefershift_isomir_ppi_pct25_10480.txt
merge_scc_anti.py
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_target/archetype_over0.26 /mnt/ntfs/Christine/before_NOV_20/output/scc_mir_target/isomir_over0.26
tumor_archetype_over0.26rpm_3_scores_nor_10216.txt.............
tumor_isomir_over0.26rpm_3_scores_nor_10216.txt.............
/mnt/ntfs/Christine/before_NOV_20/SCC_result
scc_mir_target_isomir_over0.26rpm_normalization.txt
scc_mir_target_anti_sig_isomir_over0.26rpm_normalization.txt
scc_mir_target_anti_sig_archetype_over0.26rpm_normalization.txt
total_gene_number_over0.26rpm.txt
scc_mir_target_archetype_over0.26rpm_normalization.txt
scc_isomir_pair_list.R
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_target/isomir_over0.26
tumor_isomir_over0.26rpm_3_scores_nor_10216.txt.............
/mnt/ntfs/Christine/before_NOV_20
FPKM_LUAD_tumor_matrix_verNA.txt
tumor_isomir_intersection_3_scores.txt
LUAD_tumor_isomir_hsa22_over0.26rpm_430_normalization.txt
tumor_isomir_intersection_3_scores.txt
scc_archetype_pair_list.R
/mnt/ntfs/Christine/before_NOV_20
FPKM_LUAD_tumor_matrix_verNA.txt
tumor_archetype_TC_intersection_3_scores.txt
LUAD_tumor_archetype_hsa22_over0.26rpm_430_normalization.txt
tumor_archetype_clean_intersection_3_scores.txt
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_target/archetype_over0.26
tumor_archetype_over0.26rpm_3_scores_nor_10216.txt.............
merge_scc_coexpress.py
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir
scc_coexpress_all_normalization.txt
edge_list_normalization.txt
/mnt/ntfs/Christine/before_NOV_20/output/scc_mir_mir/
scc_after_fisher_nor_10248.txt.............