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*Repeat Expansion Diseases - Coggle Diagram
*Repeat Expansion Diseases
Pathologies
Fragile X
Three generation genetic anticipation
Normal: CGG, n < 55
Permutation: CGG, 55 < n < 200
Full Mutation: CGG, n > 200
Expanded FMR1 gene
~1/3500 in males
~1/6000 in females
Expanded CGG repeats lead to hypermethylation and transcriptional shutdown
FMRP protein loss
Results in increased production of glutamate receptors in synapses
Results in loss of ability to regulate synaptic biology
Symptoms
Intellectual Disability
ASD
Elongated faces and long ears
Macroorchidism (large testicles)
FXTAS is preemptive to FXS
males: Tremor, ataxia
females: primary ovarian insufficiencies
Spinal-bulbar Muscular Atrophy
Myotonic Dystrophy (DM) Type 1
Defects of muscle, heart, and brain
Myotonia (Not being able to let go of the bar or things like that) is pathognomonic of DM
Jaw and slurring of words
Neck myotonia which causes a lot of pain as the back muscles need to hold up your head
Joint issues
The whole family is kinda diagnosed at once after one member is diagnosed with that.
Arrhythmia can be an issue with myotonic dystrophy (is the most common cause of death; pacemakers, etc. can help with that)
Cararacts are also a good thought
Hypersomnia (need to sleep) makes so many things more difficult (CNS symptom)
Anxiety and depression
Mental acuity and anger are common
Memory difficulties remembering things
Expanded CTG repeats
Normal: n = 5-30
Mildly affected: n = 50-80
Severely affected: n > 2000
Repeat length correlates with age of onset
*DM type 2 caused by expanded CCTG repeats
Summary of DM
Expanded CTG repeat
Transcribed into expanded CUG repeats
CUG repeat expression in a different gene can reproduce DM features
Sequestration to MBNL Proteins which reduces functionality of MBNL
MBNL regulates alternative splicing on the ClC1 pre-mRNA which causes a nonsense mediated decay of the ClC1 protein which affects muscle function. MBNL helps to alternatively splice out an unnecessary exon that has a stop codon. Hence its loss leading to nonsense mutations of the protein
Widespread changes in MBNL-mediated RNA splicing and RNA metabolism
Huntington's Disease
Summary
Expanded CAG repeats (>35)
Transcribed and translated into polyglutamine repeats
Myriad downstream consequences (protein aggregates, etc.)
Cell death (dramatic loss of striatal neurons in brain)
Symptoms
Motor (chorea of the face, trunk and limbs)
Cognitive (Executive dysfunction, difficulty searching memory)
Psychiatric (depression, anxiety, apathy, etc.; increased risk for suicide)
Age of onset correlates w/ repeat length
Potential Causes of Diseases
DNA
Fragile X
Friedreigh's Ataxia
RNA
Myotonic Dystrophy
Huntington's
Fragile X associated Tremor/Ataxia Syndrome
Fuch's Endothelial Corneal Dystrophy
C9ORF72/ALS/FTD
Protein
Huntington's
C9ORF72/ALS/FTD
Some Spinocerebellar Ataxias
Don't necessarily need to know all these diseases, but the main ones and knowing what the potential causes are could be useful
Friedrich's Ataxia
C90RF72/ALS/FTD
Most common form of familial amyotrophic lateral sclerosis
Symptoms
Dementia (memory impairment, personality change, language dysfunction)
Limb onset
Weakness, Spasticity, muscle atrophy, fasciculations
Bulbar onset
slow speech, jaw jerk reflex, facial weakness, tongue atrophy/fasciculations
Repeat associated non-AUG dependent translation
ASD
Recent research has implicated repeat expansion to contribute to the development of autism
Genetic Anticipation
Each generation has more severe symptoms because the repeats get longer and longer with each generation (ie. Myotonic Dystrophy)
When do repeats expand?
DNA Replication
DNA Repair
Implications: Repeats can expand in both germ and somatic cells
Repeats can happen in different portions of the gene, not just the protein coding regions
Repeats can also contribute to non-AUG initiated protein translation (Called Repeat Associated non-AUG Dependent Translation - RAN Translation)