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NGS Assembly - Coggle Diagram
NGS Assembly
When do we assemble?
What is overlap - layout consensus approach?
What do they mean when they say a problematic sequence to assemble?
What is k mer correction?
Why do we assemble?
Do we need to assemble in the first place?
What is kmer correction used for?
How does K mer correction work?
How does overlap- layout consensus work?
When is overlap - layout consensus used?
How can we solve this problematic sequence to assemble?
What is assemble and the effects of read length , repeats, and throughput
What is mapping quality
How does mapping Quality work?
What is Quality metrics?
Where is quality metrics used?
Where is scaffolding used?
What is scaffold?
How does Scaffolding work in practice?
What is contigs?
How does contigs work?
What is the difference between Contigs and Scaffold?