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NGS Alignment - Coggle Diagram
NGS Alignment
What is seed and extend?
How can it be used for searchers - BWT
What is mapping quality?
When can we align?
What is an alignment?
What is the Burrows wheeler transfrom?
How does the size distribution relate to the paired - end?
What is the size distribution?
What is mappability?
What is proper pairs?
Mappability vs mapping quality? what is the differences?
What is the breath of coverage
What is the difference between breath of coverage and depth of coverage?
What is the SAM format? and how is it used?
What does the mapping quality measure?
What is unpaired?
What is the difference between proper pairs and unpaired?
What is the difference between depth of coverage per position vs ang in a genome or locus/loci?
What is the depth of coverage per position?