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Bioinformatics is Analysis of complex biological and genetic data using…

- - - - this is pubmed database
    - - Nucleotide database is a collection of sequences from several sources, including GenBank, RefSeq, and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery.
      - the FASTA format of accession number 15112000 at nucleotide database
    - - Gene database is a free online resource for gene sequences from many species and organisms.
        The NCBI gene database includes gene sequences, gene alleles and mutations, genomes, pathways, protein sequences and so much more.
      - gene database with gene ID 204309
      - Protein databases have become a crucial part of modern biology. Huge amounts of data for protein structures, functions, and particularly sequences are being generated. These data cannot be handled without using computer databases.
        Searching databases is often the first step in the study of a new protein.
        Comparison between proteins or between protein families provides information about the relationship between proteins within a genome or across different species, and hence offers much more information than can be obtained by studying only an isolated protein
        
        FASTA format of protein (accession number 204309)
        
        the protein
      - Blast Basic Local Alignment Search Tool , which is an algorithm based search tool used for comparing and finding regions of local similarity between sequences
        BLAST tool compares nucleotide or protein sequences to sequence in a database and calculates the statistical significance of the matches.
        More or less like running a “correlation” algorithm
        BLAST program used a protein / nucleotides “query” sequence to scan a protein / nucleotides sequence database
        
        Blast P
        
        the accession number 204309 of protein and useing the accession number of FASTA format of protein and search on plast p
        
        Blast X
        
        BLASTX with accession number of FASTA format of gene 15112000
        the final result is is greater than allowed on the BLAST
        
        Blast N
        
        enter the accession number of fasta format of nucleotide 15112000 and search on blast N
        
        tblastn
        
        the accession number 204309 of protein and useing the accession number of FASTA format of protein in tblastn
        
        tblastx
        
        enter the accession number of fasta format of nucleotide 15112000 and search on tblastx
        
        BLAST database
- - - - redata
        
        for example:- by using restriction enzyme called SgeI to know full information
      - remap
        
        enter to nucleotide database and write 15112000 and enter to emboss then search about remap and paste the sequence of FASTA format of nucleotide database and run
    - - sixpack
        
        transeq
        
        enter to nucleotide database and write 15112000 and enter to emboss then search about transeq and paste the sequence of FASTA format of nucleotide database and run
        
        show ORF
        
        enter to nucleotide database and write 15112000 and enter to emboss then search about show ORF and paste the sequence of FASTA format of nucleotide database and run
        
        enter to nucleotide database and write 15112000 and enter to emboss then search about sixpack and paste the sequence of FASTA format of nucleotide database and run
  - - - enter to protein database and write 204309 then copy the FASTA format then enter to EMBOSS search about charge and paste the Seq. then run
    - - enter to protein database and write 204309 then copy the FASTA format then enter to EMBOSS search about
        iep and paste the Seq. then run
    - - enter to protein database and write 204309 then copy the FASTA format then enter to EMBOSS search about backtranseq and paste the Seq. then run