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t-SNE for Single-Cell Classification (Related work (t-SNE,…
t-SNE for
Single-Cell Classification
Introduction
Related work
t-SNE
Dimensionality reduction methods
Parametric vs non-parametric
Methods
t-SNE formulation & it's extensions
Adding new points to an existing embedding
Fast embedding methods using feature selection
Data & Experimental Setup
Single-cell data
Batch effects
Gene expression counts
Single-cell preprocessing pipeline
Gene selection
Results & Discussion
Implementation
Conclusion
What did I do?
What are the weaknesses of our approach? but works well on sc
this leads to explainable AI, add image of our annotator, this is what people do by hand