Please enable JavaScript.
Coggle requires JavaScript to display documents.
Second Sequencing Technology (Comparison of sequencing technology (J Genet…
Second Sequencing Technology
High-throughput sequencing technology
454 pyrosequencing
PLoS One. 2012. Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA
J Oral Microbiol. 2006. Pyrosequencing as a tool for better understanding of human microbiomes
Bioinformatics. 2010. Characteristics of 454 pyrosequencing data—enabling realistic simulation with flowsim
Arch Pathol Lab Med. 2013. Fundamentals of Pyrosequencing
SOLID
BMC Syst Biol. 2012. Palindromic sequence impedes sequencing-by-ligation mechanism
Applied BioSystems, 2008. SOLID System Accuracy
Animal Biotechnology. 2014. Next Generation Sequencing and Its Applications
ION torrent
Annu Rev Anal Chem. 2013. Next-generation sequencing platforms.
Nature. 2011. An integrated semiconductor device enabling non-optical genome sequencing
Illumina
Curr Protoc Hum Genet. 2009. Improved Protocols for Illumina Sequencing
Illumina. 2012. An Introduction to Next-Generation
Sequencing Technology
Illumina. 2014. An Introduction to illumina Next-Generation
Sequencing Technology for Microbiologists
Genome Biology. 2011. Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and Genome Analyzer systems
BMC Genomics. 2017. Software updates in the Illumina HiSeq
platform affect whole-genome bisulfite
sequencing
Genome Biology. 2014. Illuminating the future of DNA sequencing
Comparison of sequencing technology
J Genet Genomics. 2011. The impact of next-generation sequencing on genomics
Sam Behjati and Patrick S Tarpey. 2013. What is next generation sequencing?
J Biomed Biotechnol. 2012. Comparison of Next-Generation Sequencing Systems
BMC Genomics. 2012. A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers.
Appl Environ Microbiol. 2014. Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling
Definition
Genomics. 2016. The sequence of sequencers: The history of sequencing DNA
Methods Mol Biol. 2012. Massively Parallel Sequencing Approaches for Characterization of Structural Variation
Library preparation method
Experimental Cell Research. 2014. Library preparation methods for next-generation sequencing: Tone down the bias
Biotechniques. 2015. Library construction for next-generation sequencing: Overviews and challenges
Curr Protoc Mol Biol. 2015. Preparation of Single-Cell RNA-Seq Libraries for Next Generation Sequencing
Application
Bioinformatician
Alignment technique
Genome assmble
Biologist/Scientist
Microbiome
ADVANCES IN WOUND CARE. 2014. Next-Generation Sequencing:A Review of Technologies and Tools for Wound Microbiome Research
Transcriptomic analysis
Personalized medicine
BIOTECHNOLOGY HEALTHCARE. 2012. THE NEXT ITERATION OF PERSONALIZED MEDICINE
Quality checking
FastQC
Data from sequencer
Data format
score of quality