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BIOINFORMATICS (What is BLAST (best matching pair comparison of sequences,…
BIOINFORMATICS
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What is bioinformatics
Application of computational tools on molecular data including the means to acquire, analyze or visualize such data.
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What is BLAST
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sequnce alignment is performed based on similarity between the characters of two or more sequences to find a match sequences
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alignment between protein-protein sequences identity (marks as " * " ) and similarity (marks as " : " are important to produce a match
alignment between the query sequence and any given database sequence, allowing for mismatches and gaps indicate their degree of similarity
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What is NCBI
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located in Bethesda, Maryland
among services provided are GenBank, PubMed, Entrez and BLAST
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How to use BLAST
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description line always starts with " >" and word is following in sequence ID without space between them
DNA sequence obtained from DNA sequencing results must be saved in FASTA format using WordPad and save as text tiles
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