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CaImAn (caiman (base (movie, rois, timeseries, traces), summary_images…
CaImAn
caiman
base
movie
rois
timeseries
traces
behavior
behavior
gui
gui
cluster
component evaluation
mmapping
motion_correction
source extraction
cnmf
mapreduce
utilities
cnmfsetparams
computedfftraces
extract dfff
cnmf
merging
merge_components
spatial
basis denoising
update_spatial_components
regression ipyparrallel
determine search location
construct ellipse parrallel
threshold components
threshold components parrallel
lars regression noise old
temporal
make_G_matrix
constrained_foopsi_parallel
update_temporal_components
deconvolution
preprocessing
interpolate_missing_data
find_unsaturated_pixels
get_noise_fft
get_noise_fft_parallel
fft_psd_parallel
fft_psd_multithreading
mean_psd
estimate_time_constant
process data
cnmf
initialization
initialize_components
ICA_PCA
sparseNMF
greedyROI
imblur
hals
summary_images
max_corralation_image
local_correlation_fft
local_correlation
tests
utils
visualisation
view_patches
nb_view_patches
nb_view_patches3d
getcontours
nb_imshow
nb_plot_contours
play_matrix
matrix_montage
anim_tohtml
view_patches_bar
plot_contours
stats
utils