Intracellular MRSA
Actin Based motility
Theriot et al 2007
Molecules involves are highly complex and dynamic in relation to their environment
Filament Branching
Svitkina T.M 1999
Mullins 1999
The Arp 2/3 complex binds to the side of an exisiting mother filament when activated and nucleates the polymerisation of a new daughter filament
Pollard 2003
Continuous extension is thought to occur through filament nucleation at the leading edge, balanced by depolymierisation at the posterior zone.
Wantanabe 2002
Actin assembly and dissembly occurs throughout the whole structure
Filament branching is typically mediated by the Arp 2/3 complex
Takenawa 2007
Nucelation is enhanced at the leading edge by specific NPFs such as proteins of the WASP/ WAVE family which are capable of activating the Arp 2/3 residue on the leading edge membrane.
Theriot 2000
Biochemical dissection of actin based protrusion machinary has been greatly facilitated by the existence of motile intracellular pathogens that hijack host cell actin systems to propel themselves by leading edge machinary
Examples in bacteria
Loisel 1999
Shigella flexneri recruits host N-WASP to its surface causing the formation of comet tails that push it through the host cytosplasm
Listeria uses its own protein ActA to activate the Arp2/3 complex
Experiments modelling the intracellular bacterial process in vitro
Loisel 1999
Cytosol replaced by mixture of purified products
Theriot 1999
Using artifical objects such as beads to mimic the bacteria
Theriot 2003
Beads or lipid vesicles coated with ActA
Welch 1999 and 2003
Beads could also be coated with NPF such as N-WASP
Marecy A
Pulling gently on the load object actually accelerates actin network growth
Co et al 2007
Systematic Mutagenisis and the discovery that WH 2 is the imporant component for
Hanein et al 2005
CONFLICT: Arp 2/3 as mediator of actin attachment. Hanein's structural ecvidence shows that NPF does not remain attached after bracnch formation.
Accumulating evidence indicates that S. aureus is a facultative intracellular pathogen that can
invade and survive in different types of non-professional phagocytic cells, such as airway epithelial cells
**Garzoni, C.; Kelley, W. L., Staphylococcus aureus: new evidence for intracellular persistence. Trends in microbiology 2009, 17, 59-65.
- Sendi, P.; Proctor, R. A., Staphylococcus aureus as an intracellular pathogen: the role of small colony variants. Trends in microbiology 2009, 17, 54-8.
- Loffler, B.; Tuchscherr, L.; Niemann, S.; Peters, G., Staphylococcus aureus persistence in non-professional phagocytes. International journal of medical microbiology : IJMM 2014, 304, 170-6.**
The bacterial invasion process is an active process involving host cells and requiring an intact cytoskeleton. S. aureus expresses a multitude of adhesins, and binding to host tissue is dependent on multiple factors. However, of the fibronectin-binding proteins on the bacterial surface, fibronectin and host cell integrins seem to be the most important, and invasion proceeds by cytoskeletal rearrangements in the host cell following an F-actin-dependent zipper- type mechanism 5, 7.
**Garzoni, C.; Kelley, W. L., Staphylococcus aureus: new evidence for intracellular persistence. Trends in microbiology 2009, 17, 59-65.
- Sendi, P.; Proctor, R. A., Staphylococcus aureus as an intracellular pathogen: the role of small colony variants. Trends in microbiology 2009, 17, 54-8.
- Loffler, B.; Tuchscherr, L.; Niemann, S.; Peters, G., Staphylococcus aureus persistence in non-professional phagocytes. International journal of medical microbiology : IJMM 2014, 304, 170-6.
8.**
Phosphorylation dynamics in S.aureus
Hochgräfe et al, 2016
Using quantitive phosphoproteomics, the team idenified characteristic signalling networks in thhe host at different stages of infection.
Only minor changes in protien levels were observed but phosphorylation events showed dynamic alterations mainly in the pathways associated with cytoskeletal dynamics, cell-cell matrix contacts and GTPase signalling
Methods include: analysis of host protein kinases by substrate mapping, active regulatory site immunoblotting and predicition algorith highlighted known and novel host kinases with putative critical roles in S. aureus infection and targeted pharmacological inhibitoion of these kinases
Methods also involve creating immortal cells but introducing a viral vector , must wonder if this will affect the integrity of the cells.
Highlighted FAK, PKA, PKC AND CDK
Mapped p-proteins cpmposed of focal adhesions, regulators of the cytoskeleton, Rap signalling.
Strong overlap of commonly affected proteins between the corresponding pathways including protein kinases such as MAP1/3 (ERK2/1) and FAK
increased activation of FAK and ERK1/2 was confirmed by western blot
Noted several motifs that are known targets of CAMK2, PKA and PKC
Lots of phosphorylated peptide sequences matched the motif [pS/pT]X[R/L] a target sequence for PKA
Levels of fibronectin were increased throughout the 4 hour time period of investigation others fluctuated
Murphy, 2011
FINC binding staph is a major determinant of adhesion and internalisation
Agerer, F.; Michel, A.; Ohlsen, K.; Hauck, C. R., Integrin-mediated invasion of Staphylococcus aureus into human cells requires Src family protein-tyrosine kinases. The Journal of biological chemistry 2003, 278, 42524-31.
GTPase regulators also have altered expressio / phosphorylation during S.aureus infection - altered GAPS
Altered levels of CDC42
Altered levels of Rho (RhoA, CDC42, Rac)- cytoskeletal dynamics
Pharmacological inhibition of the tyrosine kinases FAK, Src shows the greatest reduction in intracellular viable bacteria
Dornand 2003, Nikai, 2004, Gross 2005
PKA plays a critical role in the survival of intracelullar pathogens
De,pmstrated in macrophages, Brucella / Salmonella #
Hauck 2005, FAK has been implicated ito be important for integrin mediated internalisation on human embryonic kidney cells and fibroblasts #
Dersch, 2009 PKC is known to be required for the infection of Yersinia psuedotuberculosis in epithelial cells #
Dijl 2001
Activation of PKA, PKC and Src family kinases were reported as early responsers of THP1 macrophages upon internalisation of Staph aureus #
Haglund and Welch, 2011
n the ongoing evolutionary arms race between pathogens and their hosts, pathogens tend to “think big,” generally targeting path- ways that control important cellular functions like cytoskeletal dynamics
Manning et al., 2002
estimated that roughly 30% of all cellular proteins may be modified by protein kinase activity #
Orth et al, 2011
kinases give rise to a vast network of interwoven signaling pathways, and the sheer complexity of eukaryotic kinase signaling networks still baffles scientists, biochemists, and system biologists alike
Kim et al, 2011
In many cases seemingly discreet signalling pathways are communicating but we lack deeper knowledge based on this
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It is an increasingly popular strategy to attempt to understand complex eukaryotic pathways by studying the mechanisms that pathogens use to subvert them.
Evading immune recognition
Essential immunology: Roitt
Immune system recognises PAMPs which include characteristic molecules associated with pathogens such as Protein A (McLoughlan 2016)
These are detected by PRRs like TLR, Mannose receptos and NOD-like receptos
Kim, 2011
When bound the PAMP ligand PRRs induce cascades, most commonly NFkB and MAPK pathways which trigger proinflam responses such as upregulation of cytokines and antimicrobial peptides or activation of the complemnment cascade
Kim, 2011
Activation of the MAPK and NFkB ultimately results in a cascade of activated kinases that lead to a transcriptional response
Bacterial pathogens have devised mutliple ways to interfere with NFkB signalling
Hannging 1996, Fayard 2010, Sinha 2012 PL3K / Akt signalling axis pathway
PI3L pathway is triggered by receptor kinases or ligands binding integrins leading to phosphorylation of downstream targets
Receptor activation leads to recruitment of FAK which then recuits cytoplasmic compounds of the receptor linked signalling complex including the tyrosine kinase scr, the adaptor protein Crk and P130Cas (Crk subastances). #
Crk phosphorylation leads to strong activation of the small GTPase Rac, which is required for cell motility #
Src phosphorylation triggers the association of PL3K with the siganlling complex
PI3L phosphorylates PIP2-->PIP3
This pathway leading to the recruitment of FAK is targeted by many pathogens including S.aureus (Sinha, 2012). the pathogen will either reinforce of destroy the focal adhesion
Activated PIP 3 recruits Ser /Thr kinase Akt (PKB) to the membrane via its pleckstring homology domain which binds to PIP with high affinity ( Harlam et al, 1994) . Akt regulates cell migration, metabolism, proliferation and survival.
Activation of PI3K can also activate small GTPases such as Sas and Rac which are linked to proliferation and cytoskeletal dynamics respectively ( Reedijke et al 1990, Pleiman et al 1993)
Can also activate cdc42 which activates N-wasp
Smith* et al, 2015
Ibrutinib inhibits BTK and possibly TEC in platelets
Side effect of treatment = bleeding
Quek LS, Bolen J, Watson SP. A role for Bruton’s tyrosine kinase (Btk) in platelet activation by collagen. Current Biol 1998;8: 1137–40.
79 Oda A, Ikeda Y, Ochs HD et al. Rapid tyrosine phosphorylation and activation of Bruton’s tyrosine/Tec kinases in platelets induced by collagen
BTK and Tec expressed by platelets are both involved in collagen activation
Atkinson BT, Ellmeier W, Watson SP. Tec regulates platelet activation by GPVI in the absence of Btk. Blood 2003;102:3592– 9., Oda A, Ikeda Y, Ochs HD et al. Rapid tyrosine phosphorylation and activation of Bruton’s tyrosine/Tec kinases in platelets induced by collagen binding or CD32 cross-linking. Blood 2000;95:1663–70.
80
binding og collagen to the receptor BTK or Tec leads to P13K phosphiorylation
Atkinson BT, Ellmeier W, Watson SP. Tec regulates platelet activation by GPVI in the absence of Btk. Blood 2003;102:3592–
9.
Quek LS, Bolen J, Watson SP. A role for Bruton’s tyrosine kinase (Btk) in platelet activation by collagen. Current Biol 1998;8: 1137–40.
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Following activation of P13K and they in turn activate PLC2
Autophosphorylation of BTK and phosphorylation of PLCc2 in response to collagen are both reduced in ibrutinib-treated platelets [20].
Levade M, David E, Garcia C et al. Ibrutinib treatment affects collagen and von Willebrand factor-dependent platelet functions. Blood 2014;124:3991–5.
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Primary resistance to ibrutinib has been observed only rarely and no mechanism has yet been identified, although it is intuitive that activating mutations distal to BTK (eg, mitogen-activated protein kinase [MAPK] pathway or PI3K pathway) might render a patient less sensitive toibrutinib earlyintherapy Smith, 2015
Fibronectin (Fn) is a multidomain glycoprotein found in blood plasma, other bodily fluids and the extra-cellular matrix (ECM) and serves as a natural ligand for several integrins including α5β1, αvβ3, and α4β1Leiss M, Beckmann K, Giros A, Costell M, Fassler R. The role of integrin binding sites in fibronectin matrix assembly in vivo. Curr Opin Cell Biol. 2008; 20: 502–507. doi: 10.1016/j.ceb.2008.06.001 PMID: 18586094
2.
binding Hook et al 2016
Adherence ofmicrobes to host tissues is a hallmark of infectious disease and is often medi- ated by a class of adhesins termedMSCRAMMs (Microbial Surface Components Recogniz- ing AdhesiveMatrixMolecules)
Hauck et al 2003
integrin- initiated invasion of S. aureus critically depends on additional host cell factors and we have identified cellular Src PTKs to be essential for this process.
Shigella flexeneri relies on N-WASP --> BTK
WASP and N-WASP are multidomain proteins harboring an N-terminal small GTPase binding domain (GBD) which interacts with Cdc42 and a C-terminal verprolin central acidic (VCA) do- main which interacts with the ARP2/3 complex (11).
Pollitt AY, Insall RH. 2009. WASP and SCAR/WAVE proteins: the driv- ers of actin assembly. J. Cell Sci. 122:2575–2578.
Under non- stimulating conditions, WASP/N-WASP are folded into an auto- inhibitory conformation due to interactions between the N-terminal GBD and the C-terminal VCA domain
Kim AS, Kakalis LT, Abdul-Manan N, Liu GA, Rosen MK. 2000. Autoinhibition and activation mechanisms of the Wiskott-Aldrich syn- drome protein. Nature 404:151–158.
In vitro binding of the small GTPase Cdc42 to the GBD of N-WASP in- duces the release of the autoinhibited conformation, which allows binding of the VCA domain to the Arp2/3 complex and subse- quent actin polymerization
Rohatgi R, Ma L, Miki H, Lopez M, Kirchhausen T, Takenawa T, Kirschner MW. 1999. The interaction between N-WASP and the Arp2/3 complex links Cdc42-dependent signals to actin assembly. Cell 97:221– 231.
15.
Yasuda et al, 2011
The Rho family of GTPases have important roles in the morpho- genesis of the dendritic spines1–3
of neurons in the brain and syn-
aptic plasticity4–9
by modulating the organization of the actin
cytoskeleton
Wu et al, 2013
Lyn and Syk are recrioted in B cell sinalling followed by PLC gamma 2, PI3K, BTK and VAV1
BTK is essential for the activation of the actin regulator WASP- b cell spreading and clustering
Sharma 2009
s
BTK is responsible for activating WASP by activating VAC, a guanine nucleotide exchnage factor for Cdc42, stimulating production of PIP and inducing the phosphorylation of WASP
Grimaldi et al, 1993
BTK binds to VAV at its PH domain
BTK suppresses N-WASP activity and activated WASP SHIP-1 inhibits activation of BTK and WASP and promotes N-WASP activation
Dragoi et al 2013
BTK regulates
It has been reported that btk is important for N-wasp phosphorylation in Shigella Flexeneri
Welch, 2014
IcsA is not sufficient to activate N-WASP in host cells entirely independently of host signaling proteins or pathways
The Arp2/3 complex is a weak actin nucleator, but when activated by NPFs it binds to an actin filament and robustly nucleates a new filament that emerges to form a Y-branch (Campellone and Welch, 2010; Rotty et al., 2013)
Many unrelated bacterial and viral pathogens mobilize the Arp2/3 complex to nucleate actin by mimicking or exploiting molecules ranging from tyrosine kinase substrates to NPFs, proving the flexibility of evolutionary strategies to hijack the cytoskeleton (Haglund and Welch, 2011)
IcsA is not sufficient to activate N-WASP in host cells entirely independently of host signaling proteins or pathways. It
Additional factors in actin motility
additional factors beyond Arp2/3 and NPFs were required for motility, as purified Arp2/3 only promoted actin assembly but not movement (Welch et al., 1997
Just ten years after the initial discovery of bacterial actin-based motility, a crowning achievement in the field was the reconstitution of this process using purified proteins (Loisel et al., 1999). Surprisingly, the minimal reconstitution mix required for bacterial motility consisted of the NPF tethered to the bacterial surface and four other components: actin, Arp2/3 complex, capping protein, and ADF/cofilin. In the presence of these core factors, slow motility occurred (0.5 µm/min). The role of actin and Arp2/3 in motility was already discussed above. Two mechanisms have been proposed for the function of capping protein in the reconstituted motility mix. The funneling hypothesis proposes that capping older filaments and inhibiting their growth increases the concentration of available actin monomers, leading to more rapid elongation of new uncapped filaments at the bacterial surface (Carlier et al., 1997). The monomer-gating hypothesis proposes that capping acts as a switch that gates actin monomers to the Arp2/3 complex, enhancing the rate of actin nucleation (Akin and Mullins, 2008).
Resolving these hypotheses will await further experimentation. The remaining essential factor, ADF/cofilin, severs and depolymerizes actin filaments, enabling monomer recycling for further polymerization (Carlier et al., 1997; Rosenblatt et al., 1997). Thus, motility requires factors that both enhance actin assembly and disassembly.
Although
Although motility can be reconstituted with only four components, further addition of the actin monomer-binding protein profilin and the adapter protein Ena/VASP (for Listeria only) increases the speed of movement (to ~ 3 µm/min)
Profilin is thought to promote filament elongation at barbed ends through several mechanisms including enhancing ADP/ATP exchange, displacing monomers from sequestering proteins, and enhancing the local concentration of actin monomers available for assembly. Moreover, it has been shown to be important for enhancing actin elongation during Listeria motility (Grenklo et al., 2003). Ena/ VASP proteins, which specifically bind to the proline-rich repeat regions of ActA (but not IcsA or N-WASP), enhance motility by recruiting profilin (Auerbuch et al., 2003; Geese et al., 2002) (Figure 4) and by enabling processive barbed end elongation while antagonizing the activity of capping proteins (Breitsprecher et al., 2011; Hansen and Mullins, 2010). These factors synergize with Arp2/3 to enable rapid filament elongation and actin-based motility.
The reconstitution of actin-based bacterial motility demonstrates that the process is driven by a core set of proteins that regulate actin assembly dynamics. It also provides insights into the basic biochemical mechanisms that underlie host processes like lamellipodia protrusion during cell migration, which are driven by the same set of factors (Campellone and Welch, 2010). The reconstitution approach also highlights the fact that Listeria and Shigella motility rely on a short list of components, whereas the corresponding processes in host cells are more complex. Because they represent a stripped-down system, these pathogens have served as very useful models for cell biologists and biophysicists to study the basic mechanisms that control actin-based movement. Future studies will continue to make use of pathogens to study the biochemical basis of actin-based movement and how the biochemical properties of the system enable force generation to drive motility.
Pathogen
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Shigella
Listeria
Bacteria expressing ActA or IcsA polymerize actin in cell extracts (Goldberg and Theriot, 1995; Marchand et al., 1995). However, ActA and IcsA themselves were unable to directly induce actin filament assembly, suggesting additional host proteins are required for actin nucleation (Loisel et al., 1999; Welch et al., 1997). Identification of the host actin assembly factor was made possible by the reconstitution of motility in cytoplasmic extracts, which could be fractionated and assayed for an activity that promotes actin assembly on the
Listeria surface (Theriot et al., 1994; Welch et al., 1997). A host factor sufficient for actin assembly was purified and identified as the Arp2/3 complex. Arp2/3 had previously been identified in amoebae, and was proposed to function in actin nucleation (Machesky et al., 1994), although no activity was detected in in vitro actin assembly assays (Kelleher et al., 1995). The Arp2/3 complex has since been shown to be necessary for Listeria actin assembly (Loisel et al., 1999; May et al., 1999; Yarar et al., 1999). Notably, although Arp2/3 could promote the assembly of actin by bacteria, it was not sufficient to enable motility, indicating that additional host components were required for full reconstitution of motility (Welch et al., 1997). Moreover, actin polymerization by Arp2/3 complex at the Listeria surface required ActA (Welch et al., 1997), consistent with the essential nature of ActA in actin assembly during infection.
The fact that actin assembly by Listeria requires both ActA and Arp2/3 complex suggested that these factors act together to nucleate actin assembly. Subsequent experiments using purified ActA and Arp2/3 complex demonstrated that, although neither factor alone was sufficient, together the proteins formed an efficient nucleator (Welch et al., 1998). Based on the subunit composition of Arp2/3 complex and the presence of actin related proteins Arp2 and Arp3, it was proposed that ActA is an activator or NPF for Arp2/3. Subsequent work showed that ActA was indeed the first identified member of a broad class of NPF proteins, which are characterized by the presence of actin-binding WH2 domains (W), along with Arp2/3-binding C and A motifs (collectively called WCA) (Campellone and Welch, 2010). The WCA domain is the minimal region of NPF proteins that stimulates Arp2/3-dependent actin nucleation. The NPF family also includes other pathogen proteins such as baculovirus p78/83 (see later), Rickettsia spp. RickA (Gouin et al., 2004; Jeng et al., 2004) and Burkholderia thailandensis BimA (Sitthidet et al., 2010) (Figure 4). Thus, expressing proteins that mimic NPFs is a conserved mechanism of pathogenesis, and studying how pathogens deploy their NPFs will shed light on both pathogenic strategies as well as the function and regulation of actin assembly in uninfected cells.
It is noteworthy that Listeria actin-based motility appears to occur largely independently of regulation by host signaling pathways (tyrosine kinases and GTPases) that control actin assembly (Ebel et al., 1999; Marchand et al., 1995). However, it has been shown that the serine-threonine kinase CK2 phosphorylates ActA, enhancing Arp2/3 binding and Listeria motility, similar to the function for CK2 in phosphorylating host NPFs WASP and WAVE (Chong et al., 2009). Notably, despite the activity of CK2, bacterially expressed and purified ActA is active (Skoble et al., 2000; Welch et al., 1998). Thus, Listeria has evolved the ability to bypass the requirement for many host cell actin regulatory pathways, which differs from the behavior of other pathogens including Shigella and vaccinia virus.
Shigella
The discovery that ActA is an NPF for Arp2/3 complex suggested that Shigella IcsA might possess a similar activity. However, biochemical studies indicated that this is not the case (Egile et al., 1999). The mechanism that IcsA employs to promote actin nucleation emerged from a seminal study that implicated N-WASP in Shigella motility (Suzuki et al., 1998). This study reported that N-WASP localizes at the site on Shigella from which the actin tail emerges (Figure 4). In contrast, N-WASP is not recruited by Listeria. Interestingly, Shigella specifically engages N-WASP but cannot recruit other NPFs, including the closely related WASP that is expressed in hematopoietic cell lineages (Suzuki et al., 2002). Consistent with this, Shigella cannot undergo actin-based motility in macrophages, which express WASP but not N-WASP (Suzuki et al., 2002). Moreover, they do not move in cells expressing dominant negative variants of N-WASP or in N-WASP −/− cells (Lommel et al., 2001; Snapper et al., 2001; Suzuki et al., 1998). Notably, N-WASP was implicated in Shigella
Welch and Way Page 6
motility before it was demonstrated to be an NPF for Arp2/3, and thus studies with Shigella were among the first to implicate N-WASP in actin nucleation.
The mechanism of N-WASP recruitment to Shigella involves direct binding to the IcsA protein. In particular, the glycine-rich repeats of IcsA, which are implicated in actin assembly, bind N-WASP in vitro (Suzuki et al., 1998) (Figure 4). In an influential study, it was shown that IcsA binding causes N-WASP to shift from an inactive auto-inhibited conformation to an open state where the WCA domain of N-WASP activates Arp2/3 complex (Egile et al., 1999) (Figure 4). Consistent with this, Arp2/3 complex was required for Shigella motility. This finding was remarkable because it built on a contemporary report
that the host signaling molecules Cdc42 and PIP2 also bind to N-WASP and cause a change from an inactive to an active NPF (Rohatgi et al., 1999). Thus, it appears that Shigella IcsA evolved as a mimic of host signaling pathways that recruit and activate N-WASP, in contrast with Listeria ActA, which mimics activated N-WASP.
IcsA is not sufficient to activate N-WASP in host cells entirely independently of host signaling proteins or pathways. It has been reported that the activities of Abl kinase (Burton et al., 2005) and Bruton’s tyrosine kinase (Btk) (Dragoi et al., 2013) are important for N- WASP phosphorylation and Shigella motility. N-WASP activation and actin assembly by Shigella also requires Toca-1 (Leung et al., 2008), a cellular cofactor needed for N-WASP
activation by Cdc42 and PIP2 (Ho et al., 2004) (Figure 4). However, N-WASP activation is independent of other cellular factors needed for N-WASP activity including Cdc42 or the WASP-interacting protein (WIP) (Moreau et al., 2000). Thus, IcsA bypasses the need for
Cdc42 and PIP2 in N-WASP activation, but not the requirement for other N-WASP activating inputs.
Reconstitu
Dragoi et al 3013
Btk depletion led to a striking decrease in the number of bacteria displaying actin-based motility in HT-29 cells. The
The effect on actin tail formation was matched by a decrease in the number of bacteria displaying N-WASP recruit- ment
Altogether, our results support the notion that, in HT-29 intestinal cells, S. flexneri actin-based motility is facilitated by the Btk-mediated phosphorylation of N-WASP on Y256, which sup- ports N-WASP recruitment to the bacterial surface and the effi- ciency of actin tail formation
To our knowledge, this is the first report of a role for Btk-mediated phosphorylation of N-WASP in a nonhematopoietic cell type. Interestingly, we observed a striking increase in Btk-dependent N-WASP phosphorylation upon S. flexneri infection, suggesting that the infection process modulates Btk activity
The PI3K/FAK/Rho signaling pathway normally promotes global rearrangements in endothelial cell architecture in response to apical signaling events and mechanical deformation ollins C, Guilluy C, Welch C, O'Brien ET, Hahn K, et al. (2012) Localized tensional forces on PECAM-1 elicit a global mechanotransduction response via the integrin-Rho
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